Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna nucleotidyltransferase (cca-adding enzyme) | SAMN05444679_104279 | Not Available | Negative | 1520793 - 1522049 | 45940.5 |
| glutathione s-transferase | SAMN05444679_104280 | Not Available | Negative | 1522091 - 1522774 | 25463.9 |
| putative mg2+ transporter-c (mgtc) family protein | SAMN05444679_104281 | Not Available | Negative | 1522860 - 1523420 | 19454.0 |
| soluble lytic murein transglycosylase | SAMN05444679_104282 | Not Available | Negative | 1523420 - 1525441 | 74316.4 |
| 5,10-methenyltetrahydrofolate synthetase | SAMN05444679_104283 | Not Available | Positive | 1525451 - 1526068 | 23084.9 |
| dna-binding transcriptional regulator, lysr family | SAMN05444679_104284 | Not Available | Negative | 1526070 - 1527053 | 36638.7 |
| protein of unknown function | SAMN05444679_104285 | Not Available | Positive | 1527193 - 1527513 | 11139.1 |
| sensors of blue-light using fad | SAMN05444679_104286 | Not Available | Negative | 1527532 - 1527936 | 15080.2 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN05444679_104287 | Not Available | Positive | 1528028 - 1528798 | 29275.2 |
| hypothetical protein | SAMN05444679_104288 | Not Available | Positive | 1528949 - 1530214 | 45738.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
