Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid adenylation domain-containing protein | SAMN05444679_104259 | Not Available | Negative | 1492987 - 1498002 | 183075.0 |
| amino acid adenylation domain-containing protein | SAMN05444679_104260 | Not Available | Negative | 1497999 - 1505321 | 259917.0 |
| probable phosphoglycerate mutase | SAMN05444679_104261 | Not Available | Negative | 1505654 - 1506292 | 23008.2 |
| protein of unknown function | SAMN05444679_104262 | Not Available | Negative | 1506337 - 1506963 | 22864.9 |
| trna s(2)c-32 sulfurtransferase | SAMN05444679_104263 | Not Available | Negative | 1506992 - 1507903 | 34093.3 |
| dihydroneopterin aldolase | SAMN05444679_104264 | Not Available | Negative | 1507903 - 1508292 | 14692.7 |
| hypothetical protein | SAMN05444679_104265 | Not Available | Negative | 1508289 - 1509089 | 28083.5 |
| sam-dependent methyltransferase, mida family | SAMN05444679_104266 | Not Available | Positive | 1509107 - 1510204 | 39923.5 |
| taurine dioxygenase | SAMN05444679_104267 | Not Available | Positive | 1510237 - 1511127 | 33475.8 |
| hypothetical protein | SAMN05444679_104268 | Not Available | Negative | 1511150 - 1511536 | 14509.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
