Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444679_104249 | Not Available | Negative | 1481410 - 1482066 | 23311.4 |
| two-component system, ntrc family, sensor histidine kinase glrk | SAMN05444679_104250 | Not Available | Negative | 1482098 - 1483525 | 51963.8 |
| pp_01433 | SAMN05444679_104251 | Not Available | Negative | 1483525 - 1484895 | Not Available |
| hypothetical protein | SAMN05444679_104252 | Not Available | Negative | 1484997 - 1485467 | 17085.5 |
| rnd family efflux transporter, mfp subunit | SAMN05444679_104253 | Not Available | Positive | 1485688 - 1486941 | 43633.1 |
| hydrophobic/amphiphilic exporter-1, hae1 family | SAMN05444679_104254 | Not Available | Positive | 1486938 - 1490093 | 112831.0 |
| nucleotidyltransferase | SAMN05444679_104255 | Not Available | Positive | 1490203 - 1490490 | 10659.9 |
| hypothetical protein | SAMN05444679_104256 | Not Available | Negative | 1490520 - 1491461 | 33744.7 |
| serine aminopeptidase, s33 | SAMN05444679_104257 | Not Available | Negative | 1491454 - 1492260 | 29753.6 |
| 4'-phosphopantetheinyl transferase | SAMN05444679_104258 | Not Available | Negative | 1492257 - 1492976 | 25967.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
