Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonucleoside-diphosphate reductase beta chain | SAMN05444679_104239 | Not Available | Negative | 1466588 - 1467814 | 46919.9 |
| ribonucleoside-diphosphate reductase alpha chain | SAMN05444679_104240 | Not Available | Negative | 1467965 - 1470892 | 108117.0 |
| ampd protein | SAMN05444679_104241 | Not Available | Negative | 1471242 - 1471847 | 22533.3 |
| two-component system, ntrc family, response regulator pilr | SAMN05444679_104242 | Not Available | Negative | 1471825 - 1473345 | 54367.8 |
| two-component system, ntrc family, sensor histidine kinase pils | SAMN05444679_104243 | Not Available | Negative | 1473350 - 1475041 | 61341.3 |
| uncharacterized protein | SAMN05444679_104244 | Not Available | Negative | 1475054 - 1475290 | 8414.33 |
| abc-type uncharacterized transport system, permease component | SAMN05444679_104245 | Not Available | Negative | 1475287 - 1476096 | 28692.9 |
| signal recognition particle subunit ffh/srp54 (srp54) | SAMN05444679_104246 | Not Available | Positive | 1476177 - 1477559 | 49484.2 |
| membrane glycosyltransferase | SAMN05444679_104247 | Not Available | Negative | 1477614 - 1479614 | 73018.4 |
| two component, sigma54 specific, transcriptional regulator, fis family | SAMN05444679_104248 | Not Available | Negative | 1480007 - 1481413 | 50823.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
