Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444679_104229 | Not Available | Negative | 1457570 - 1458070 | 18613.0 |
| udp-n-acetylmuramate: l-alanyl-gamma-d-glutamyl-meso-diaminopimelate ligase | SAMN05444679_104230 | Not Available | Negative | 1458075 - 1459478 | 49936.8 |
| hypothetical protein | SAMN05444679_104231 | Not Available | Positive | 1459546 - 1460139 | 22037.3 |
| thiol-disulfide isomerase or thioredoxin | SAMN05444679_104232 | Not Available | Positive | 1460136 - 1460669 | 18865.8 |
| acetyl-coa carboxylase biotin carboxyl carrier protein | SAMN05444679_104233 | Not Available | Positive | 1460792 - 1461259 | 15866.2 |
| acetyl-coa carboxylase, biotin carboxylase subunit | SAMN05444679_104234 | Not Available | Positive | 1461262 - 1462611 | 49516.7 |
| [lsu ribosomal protein l11p]-lysine n-methyltransferase | SAMN05444679_104235 | Not Available | Positive | 1462628 - 1463512 | 31492.4 |
| mj0042 family finger-like domain-containing protein | SAMN05444679_104236 | Not Available | Positive | 1463555 - 1464865 | 46293.4 |
| adenosine kinase | SAMN05444679_104237 | Not Available | Positive | 1464909 - 1465811 | 32521.1 |
| histone h1-like nucleoprotein hc2 | SAMN05444679_104238 | Not Available | Negative | 1465915 - 1466394 | 15621.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
