Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphatidate cytidylyltransferase | SAMN05444679_104219 | Not Available | Negative | 1446431 - 1447501 | 39902.3 |
| acyltransferase | SAMN05444679_104220 | Not Available | Negative | 1447498 - 1448256 | 27570.3 |
| monofunctional biosynthetic peptidoglycan transglycosylase | SAMN05444679_104221 | Not Available | Negative | 1448359 - 1449108 | 27761.5 |
| shikimate dehydrogenase | SAMN05444679_104222 | Not Available | Negative | 1449105 - 1449947 | 29149.0 |
| protein tonb | SAMN05444679_104223 | Not Available | Negative | 1449950 - 1450813 | 31950.2 |
| exoribonuclease-2 | SAMN05444679_104224 | Not Available | Negative | 1450810 - 1452873 | 74395.7 |
| hypothetical protein | SAMN05444679_104225 | Not Available | Negative | 1452923 - 1453519 | 22243.6 |
| cell elongation-specific peptidoglycan biosynthesis regulator roda | SAMN05444679_104226 | Not Available | Positive | 1453569 - 1454723 | 41419.3 |
| microcin-processing peptidase 2. unknown type peptidase. merops family u62 | SAMN05444679_104227 | Not Available | Positive | 1454757 - 1456217 | 51374.0 |
| 3-deoxy-d-arabinoheptulosonate-7-phosphate synthase | SAMN05444679_104228 | Not Available | Positive | 1456435 - 1457553 | 40418.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
