Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramate--l-alanine ligase | SAMN05444679_104209 | Not Available | Positive | 1438168 - 1439625 | 51180.6 |
| d-alanine-d-alanine ligase | SAMN05444679_104210 | Not Available | Positive | 1439622 - 1440581 | 34468.2 |
| cell division protein ftsq | SAMN05444679_104211 | Not Available | Positive | 1440581 - 1441363 | 28375.1 |
| cell division protein ftsa | SAMN05444679_104212 | Not Available | Positive | 1441380 - 1442609 | 43622.1 |
| cell division protein ftsz | SAMN05444679_104213 | Not Available | Positive | 1442768 - 1443976 | 41627.6 |
| udp-3-o-[3-hydroxymyristoyl] n-acetylglucosamine deacetylase | SAMN05444679_104214 | Not Available | Positive | 1444055 - 1444978 | 33640.3 |
| hypothetical protein | SAMN05444679_104215 | Not Available | Positive | 1444997 - 1445173 | 6626.49 |
| looped-hinge helix dna binding domain-containing protein, abrb family | SAMN05444679_104216 | Not Available | Positive | 1445209 - 1445469 | 9195.36 |
| predicted nucleic-acid-binding protein, contains pin domain | SAMN05444679_104217 | Not Available | Positive | 1445466 - 1445864 | 14563.4 |
| holliday junction endonuclease ruvc | SAMN05444679_104218 | Not Available | Negative | 1445875 - 1446423 | 19126.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
