Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mraz protein | SAMN05444679_104199 | Not Available | Positive | 1426533 - 1426967 | 16057.3 |
| 16s rrna (cytosine1402-n4)-methyltransferase | SAMN05444679_104200 | Not Available | Positive | 1426976 - 1427896 | 33494.0 |
| cell division protein ftsl | SAMN05444679_104201 | Not Available | Positive | 1427899 - 1428261 | 13319.3 |
| peptidoglycan synthetase ftsi | SAMN05444679_104202 | Not Available | Positive | 1428258 - 1430015 | 64087.2 |
| udp-n-acetylmuramoylalanyl-d-glutamate--2, 6-diaminopimelate ligase | SAMN05444679_104203 | Not Available | Positive | 1430015 - 1431499 | 52004.2 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | SAMN05444679_104204 | Not Available | Positive | 1431523 - 1432941 | 49443.0 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | SAMN05444679_104205 | Not Available | Positive | 1432958 - 1434136 | 43390.1 |
| udp-n-acetylmuramoylalanine--d-glutamate ligase | SAMN05444679_104206 | Not Available | Positive | 1434142 - 1435824 | 58696.2 |
| cell division-specific peptidoglycan biosynthesis regulator ftsw | SAMN05444679_104207 | Not Available | Positive | 1435821 - 1437113 | 46691.8 |
| udp-n-acetylglucosamine-n- acetylmuramylpentapeptide n-acetylglucosamine transferase | SAMN05444679_104208 | Not Available | Positive | 1437110 - 1438171 | 37333.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
