Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chap domain-containing protein | SAMN05444679_101128 | Not Available | Positive | 113367 - 114155 | 28066.6 |
| copper amine oxidase, enzyme domain | SAMN05444679_101129 | Not Available | Positive | 114319 - 115953 | 59165.7 |
| transcriptional regulator, merr family | SAMN05444679_101130 | Not Available | Negative | 115980 - 116384 | 14643.6 |
| mercuric ion transport protein | SAMN05444679_101131 | Not Available | Positive | 116451 - 116873 | 14669.0 |
| hypothetical protein | SAMN05444679_101132 | Not Available | Positive | 116870 - 117145 | 9924.96 |
| hypothetical protein | SAMN05444679_101133 | Not Available | Negative | 117187 - 117378 | 7604.41 |
| hypothetical protein | SAMN05444679_101134 | Not Available | Negative | 117635 - 117925 | 10274.9 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05444679_101135 | Not Available | Negative | 118002 - 119147 | 42652.8 |
| putative methyltransferase, lic12133 family | SAMN05444679_101136 | Not Available | Negative | 119277 - 120101 | 31235.3 |
| cu and ag efflux protein cusf | SAMN05444679_101137 | Not Available | Negative | 120153 - 120503 | 12038.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
