Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_104179 | Not Available | Positive | 1406421 - 1407449 | 35198.8 |
| ubiquinone/menaquinone biosynthesis c-methylase ubie | SAMN05444679_104180 | Not Available | Negative | 1407612 - 1408466 | 31102.9 |
| dna-binding transcriptional regulator, merr family | SAMN05444679_104181 | Not Available | Positive | 1408542 - 1408985 | 16010.7 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_104182 | Not Available | Positive | 1409127 - 1410092 | 33015.0 |
| 2-methylisocitrate lyase, pep mutase family | SAMN05444679_104183 | Not Available | Positive | 1410095 - 1410967 | 30546.9 |
| predicted metal-dependent hydrolase, tim-barrel fold | SAMN05444679_104184 | Not Available | Positive | 1410942 - 1411772 | 30144.9 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_104185 | Not Available | Positive | 1411822 - 1412808 | 34370.8 |
| transcriptional regulator, lysr family | SAMN05444679_104186 | Not Available | Negative | 1412796 - 1413692 | 32013.7 |
| predicted flavoprotein czco associated with the cation diffusion facilitator czcd | SAMN05444679_104187 | Not Available | Negative | 1413692 - 1415230 | 55663.8 |
| 2-hydroxychromene-2-carboxylate isomerase | SAMN05444679_104188 | Not Available | Positive | 1415252 - 1415887 | 23746.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
