Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05444679_104158 | Not Available | Positive | 1386188 - 1386964 | 27955.4 |
| heat shock protein. metallo peptidase. merops family m48b | SAMN05444679_104159 | Not Available | Positive | 1387148 - 1388020 | 30622.0 |
| hypothetical protein | SAMN05444679_104160 | Not Available | Negative | 1388152 - 1389777 | 57874.7 |
| ribbon-helix-helix protein, copg family | SAMN05444679_104161 | Not Available | Positive | 1389862 - 1390128 | 9686.85 |
| predicted nucleic acid-binding protein, contains pin domain | SAMN05444679_104162 | Not Available | Positive | 1390103 - 1390525 | 15480.3 |
| hypothetical protein | SAMN05444679_104163 | Not Available | Positive | 1390645 - 1391427 | 28375.9 |
| cysteine synthase | SAMN05444679_104164 | Not Available | Negative | 1391432 - 1392352 | 32331.3 |
| hypothetical protein | SAMN05444679_104166 | Not Available | Negative | 1392734 - 1393375 | 22884.7 |
| 23s rrna pseudouridine2604 synthase | SAMN05444679_104167 | Not Available | Negative | 1393375 - 1394085 | 25839.5 |
| glyoxylase, beta-lactamase superfamily ii | SAMN05444679_104168 | Not Available | Negative | 1394082 - 1395749 | 60074.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
