Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidase | SAMN05444679_104148 | Not Available | Negative | 1375572 - 1376750 | 41279.2 |
| peptide/nickel transport system atp-binding protein | SAMN05444679_104149 | Not Available | Negative | 1376771 - 1377760 | 35332.3 |
| peptide/nickel transport system atp-binding protein | SAMN05444679_104150 | Not Available | Negative | 1377808 - 1378845 | 37149.9 |
| peptide/nickel transport system permease protein | SAMN05444679_104151 | Not Available | Negative | 1378850 - 1379749 | 31404.2 |
| peptide/nickel transport system permease protein | SAMN05444679_104152 | Not Available | Negative | 1379763 - 1380716 | 34533.1 |
| abc-type transport system, substrate-binding protein | SAMN05444679_104153 | Not Available | Negative | 1380816 - 1382483 | 60668.9 |
| hypothetical protein | SAMN05444679_104154 | Not Available | Negative | 1382557 - 1383330 | 27959.4 |
| transcriptional regulator, lysr family | SAMN05444679_104155 | Not Available | Negative | 1383314 - 1384330 | 36737.6 |
| dihydroorotase | SAMN05444679_104156 | Not Available | Positive | 1384411 - 1385451 | 38027.5 |
| tigr00288 family protein | SAMN05444679_104157 | Not Available | Positive | 1385448 - 1386191 | 26589.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
