Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydrofolate reductase | SAMN05444679_104138 | Not Available | Negative | 1366809 - 1367456 | 23157.6 |
| dioxygenase | SAMN05444679_104139 | Not Available | Negative | 1367531 - 1368499 | 32705.6 |
| two-component system, ompr family, response regulator | SAMN05444679_104140 | Not Available | Negative | 1368594 - 1369325 | 26666.1 |
| signal transduction histidine kinase | SAMN05444679_104141 | Not Available | Positive | 1369491 - 1371623 | 73275.0 |
| n-carbamoyl-l-amino-acid hydrolase | SAMN05444679_104142 | Not Available | Positive | 1371668 - 1372966 | 45613.2 |
| ureidoglycolate lyase | SAMN05444679_104143 | Not Available | Positive | 1372966 - 1373457 | 16965.4 |
| uncharacterized conserved protein yndb, ahsa1/start domain | SAMN05444679_104144 | Not Available | Negative | 1373444 - 1373908 | 17639.6 |
| uncharacterized conserved protein | SAMN05444679_104145 | Not Available | Negative | 1373920 - 1374399 | 17533.9 |
| 2-methylisocitrate lyase, pep mutase family | SAMN05444679_104146 | Not Available | Positive | 1374418 - 1375242 | 28742.9 |
| hypothetical protein | SAMN05444679_104147 | Not Available | Negative | 1375239 - 1375448 | 7601.04 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
