Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lactate dehydrogenase | SAMN05444679_104118 | Not Available | Positive | 1343822 - 1344760 | 33098.1 |
| transcriptional regulator, lysr family | SAMN05444679_104119 | Not Available | Positive | 1344782 - 1345762 | 35729.8 |
| amino acid abc transporter substrate-binding protein, paat family | SAMN05444679_104120 | Not Available | Positive | 1346123 - 1347022 | 32095.4 |
| amino acid abc transporter membrane protein 1, paat family | SAMN05444679_104121 | Not Available | Positive | 1347116 - 1347850 | 27235.7 |
| amino acid abc transporter membrane protein 2, paat family | SAMN05444679_104122 | Not Available | Positive | 1347852 - 1348541 | 25580.1 |
| glutamate/aspartate transport system atp-binding protein | SAMN05444679_104123 | Not Available | Positive | 1348554 - 1349303 | 27516.8 |
| tripartite atp-independent transporter solute receptor, dctp family | SAMN05444679_104124 | Not Available | Negative | 1349447 - 1350481 | 37270.2 |
| trap transporter, dctm subunit | SAMN05444679_104125 | Not Available | Negative | 1350505 - 1351803 | 45512.9 |
| trap-type c4-dicarboxylate transport system, small permease component | SAMN05444679_104126 | Not Available | Negative | 1351800 - 1352333 | 19663.1 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_104127 | Not Available | Negative | 1352448 - 1353443 | 34914.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
