Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein, duf2147 family | SAMN05444679_104108 | Not Available | Positive | 1333238 - 1333669 | 15534.7 |
| 3-hydroxyacyl-coa dehydrogenase | SAMN05444679_104109 | Not Available | Positive | 1333693 - 1336092 | 85838.7 |
| acetyl-coa acyltransferase | SAMN05444679_104110 | Not Available | Positive | 1336118 - 1337314 | 41503.3 |
| predicted alpha/beta hydrolase | SAMN05444679_104111 | Not Available | Positive | 1337359 - 1338264 | 33568.2 |
| thioesterase-like superfamily protein | SAMN05444679_104112 | Not Available | Positive | 1338296 - 1339126 | 30042.6 |
| short-chain dehydrogenase | SAMN05444679_104113 | Not Available | Positive | 1339131 - 1339859 | 26292.5 |
| 2-hydroxychromene-2-carboxylate isomerase | SAMN05444679_104114 | Not Available | Positive | 1339870 - 1340466 | 21802.2 |
| enoyl-coa hydratase/carnithine racemase | SAMN05444679_104115 | Not Available | Positive | 1340654 - 1341418 | 27265.2 |
| acyl-coa thioesterase ycia | SAMN05444679_104116 | Not Available | Negative | 1341493 - 1341915 | 15199.5 |
| atp-binding cassette, subfamily b | SAMN05444679_104117 | Not Available | Positive | 1341957 - 1343789 | 67604.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
