Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidophosphoribosyltransferase | SAMN05444679_101118 | Not Available | Positive | 105616 - 107136 | 55434.6 |
| o-succinylhomoserine sulfhydrylase | SAMN05444679_101119 | Not Available | Positive | 107152 - 108366 | 42673.0 |
| glutamyl-trna synthetase | SAMN05444679_101120 | Not Available | Positive | 108363 - 109751 | 51167.2 |
| Trna-ala | Not Available | Not Available | Positive | 109786 - 109858 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 109913 - 109985 | Not Available |
| Trna-asp | Not Available | Not Available | Positive | 110060 - 110133 | Not Available |
| hypothetical protein | SAMN05444679_101124 | Not Available | Negative | 110207 - 110656 | 16257.3 |
| protein of unknown function | SAMN05444679_101125 | Not Available | Negative | 110683 - 111369 | 25161.7 |
| uncharacterized membrane protein ysda, duf1294 family | SAMN05444679_101126 | Not Available | Negative | 111786 - 112403 | 22654.5 |
| hypothetical protein | SAMN05444679_101127 | Not Available | Positive | 112687 - 113148 | 16672.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
