Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat-containing protein | SAMN05444679_10488 | Not Available | Negative | 1311150 - 1311902 | 28126.7 |
| gntr family transcriptional regulator | SAMN05444679_10489 | Not Available | Positive | 1312029 - 1312811 | 28876.9 |
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN05444679_10490 | Not Available | Positive | 1312827 - 1314029 | 43311.3 |
| amino acid/amide abc transporter membrane protein 1, haat family | SAMN05444679_10491 | Not Available | Positive | 1314121 - 1314993 | 30516.5 |
| amino acid/amide abc transporter membrane protein 2, haat family | SAMN05444679_10492 | Not Available | Positive | 1314990 - 1315970 | 33900.1 |
| amino acid/amide abc transporter atp-binding protein 1, haat family | SAMN05444679_10493 | Not Available | Positive | 1315963 - 1316718 | 26387.3 |
| amino acid/amide abc transporter atp-binding protein 2, haat family | SAMN05444679_10494 | Not Available | Positive | 1316715 - 1317425 | 25793.6 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_10495 | Not Available | Positive | 1317451 - 1318407 | 32782.8 |
| 3-isopropylmalate/(r)-2-methylmalate dehydratase large subunit | SAMN05444679_10496 | Not Available | Positive | 1318404 - 1319681 | 45058.1 |
| 3-isopropylmalate/(r)-2-methylmalate dehydratase small subunit | SAMN05444679_10497 | Not Available | Positive | 1319678 - 1320175 | 17698.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
