Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444679_10478 | Not Available | Positive | 1303243 - 1303809 | 20131.1 |
| hypothetical protein | SAMN05444679_10479 | Not Available | Positive | 1303824 - 1304414 | 20912.7 |
| uncharacterized oxidoreductase | SAMN05444679_10480 | Not Available | Negative | 1304465 - 1305523 | 36387.6 |
| altronate hydrolase | SAMN05444679_10481 | Not Available | Negative | 1305541 - 1307067 | 53847.9 |
| transcriptional regulator, gntr family | SAMN05444679_10482 | Not Available | Negative | 1307087 - 1307794 | 26092.2 |
| 2-keto-3-deoxy-l-fuconate dehydrogenase | SAMN05444679_10483 | Not Available | Positive | 1307944 - 1308678 | 25373.6 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN05444679_10484 | Not Available | Positive | 1308675 - 1309421 | 26152.4 |
| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) | SAMN05444679_10485 | Not Available | Positive | 1309444 - 1310292 | 30544.3 |
| mrna interferase mazf | SAMN05444679_10486 | Not Available | Negative | 1310315 - 1310668 | 13186.8 |
| antitoxin maze | SAMN05444679_10487 | Not Available | Negative | 1310668 - 1310928 | 9209.37 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
