Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome p450 | SAMN05444679_10468 | Not Available | Negative | 1288105 - 1289541 | 52721.5 |
| acetyltransferase (gnat) family protein | SAMN05444679_10469 | Not Available | Negative | 1289607 - 1290260 | 23889.0 |
| hypothetical protein | SAMN05444679_10470 | Not Available | Positive | 1290477 - 1292027 | 55285.8 |
| choline dehydrogenase | SAMN05444679_10471 | Not Available | Positive | 1292024 - 1295794 | 135251.0 |
| predicted atpase | SAMN05444679_10472 | Not Available | Negative | 1295757 - 1298393 | 94795.8 |
| hypothetical protein | SAMN05444679_10473 | Not Available | Negative | 1298490 - 1298888 | 14673.3 |
| is66 c-terminal element | SAMN05444679_10474 | Not Available | Negative | 1299581 - 1300570 | 36104.5 |
| chey chemotaxis protein or a chey-like rec (receiver) domain | SAMN05444679_10475 | Not Available | Negative | 1300674 - 1301063 | 14196.8 |
| hypothetical protein | SAMN05444679_10476 | Not Available | Negative | 1301166 - 1302557 | 50093.3 |
| hypothetical protein | SAMN05444679_10477 | Not Available | Negative | 1302644 - 1302976 | 12104.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
