Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-glutamate abc transporter membrane protein /l-aspartate abc transporter membrane protein | SAMN05444679_10458 | Not Available | Positive | 1279371 - 1280138 | 28419.5 |
| l-glutamate abc transporter membrane protein /l-aspartate abc transporter membrane protein | SAMN05444679_10459 | Not Available | Positive | 1280135 - 1280827 | 25429.1 |
| transcriptional regulator, iclr family | SAMN05444679_10460 | Not Available | Positive | 1280846 - 1281637 | 28024.5 |
| hypothetical protein | SAMN05444679_10461 | Not Available | Negative | 1281642 - 1282298 | 24147.6 |
| hypothetical protein | SAMN05444679_10462 | Not Available | Positive | 1282517 - 1283152 | 23634.0 |
| lytic murein transglycosylase | SAMN05444679_10463 | Not Available | Positive | 1283322 - 1284473 | 41459.8 |
| hypothetical protein | SAMN05444679_10464 | Not Available | Negative | 1284470 - 1284937 | 16746.7 |
| galactose oxidase | SAMN05444679_10465 | Not Available | Positive | 1285143 - 1287053 | 65456.2 |
| hypothetical protein | SAMN05444679_10466 | Not Available | Positive | 1287086 - 1287523 | 15282.2 |
| protein sco1/2 | SAMN05444679_10467 | Not Available | Positive | 1287520 - 1288122 | 20763.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
