Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ompa family protein | SAMN05444679_10448 | Not Available | Negative | 1269957 - 1270604 | 22938.4 |
| hypothetical protein | SAMN05444679_10449 | Not Available | Negative | 1270604 - 1272409 | 64419.1 |
| protein of unknown function | SAMN05444679_10450 | Not Available | Negative | 1272406 - 1273053 | 23135.7 |
| alkaline and neutral invertase | SAMN05444679_10451 | Not Available | Negative | 1273135 - 1274319 | 44478.2 |
| hypothetical protein | SAMN05444679_10452 | Not Available | Negative | 1274422 - 1274649 | 8160.95 |
| hypothetical protein | SAMN05444679_10453 | Not Available | Negative | 1275209 - 1275685 | 16698.3 |
| hypothetical protein | SAMN05444679_10454 | Not Available | Positive | 1275834 - 1276307 | 17080.4 |
| hypothetical protein | SAMN05444679_10455 | Not Available | Negative | 1276530 - 1276796 | 9817.38 |
| selenocysteine lyase/cysteine desulfurase | SAMN05444679_10456 | Not Available | Positive | 1277225 - 1278403 | 42983.7 |
| l-glutamate-binding protein /l-aspartate-binding protein | SAMN05444679_10457 | Not Available | Positive | 1278441 - 1279340 | 32514.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
