Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter substrate-binding protein, paat family | SAMN05444679_10428 | Not Available | Positive | 1247631 - 1248473 | 30459.2 |
| transcriptional regulator, lysr family | SAMN05444679_10429 | Not Available | Negative | 1248487 - 1249428 | 34376.4 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_10430 | Not Available | Positive | 1249519 - 1250490 | 33968.3 |
| 4-hydroxythreonine-4-phosphate dehydrogenase | SAMN05444679_10431 | Not Available | Positive | 1250511 - 1251512 | 34883.2 |
| hypothetical protein | SAMN05444679_10432 | Not Available | Negative | 1251550 - 1252281 | 26255.4 |
| pap2 superfamily protein | SAMN05444679_10433 | Not Available | Negative | 1252345 - 1253436 | 39306.5 |
| dmso/tmao reductase yedyz, molybdopterin-dependent catalytic subunit | SAMN05444679_10434 | Not Available | Negative | 1253755 - 1254918 | 43185.9 |
| glutamate carboxypeptidase | SAMN05444679_10435 | Not Available | Negative | 1255125 - 1256381 | 44509.7 |
| hypothetical protein | SAMN05444679_10436 | Not Available | Negative | 1256451 - 1256798 | 12690.5 |
| tigr02594 family protein | SAMN05444679_10437 | Not Available | Negative | 1256901 - 1257728 | 29150.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
