Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid transport system atp-binding protein | SAMN05444679_1048 | Not Available | Positive | 1228379 - 1229122 | 27234.3 |
| n-methylhydantoinase a | SAMN05444679_1049 | Not Available | Positive | 1229161 - 1231251 | 73797.9 |
| n-methylhydantoinase b | SAMN05444679_10410 | Not Available | Positive | 1231263 - 1232951 | 60491.5 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN05444679_10411 | Not Available | Positive | 1232951 - 1233754 | 27841.7 |
| 4-hydroxy-2-oxoheptanedioate aldolase | SAMN05444679_10412 | Not Available | Positive | 1233770 - 1234492 | 25785.1 |
| lysr family transcriptional regulator, nitrogen assimilation regulatory protein | SAMN05444679_10413 | Not Available | Negative | 1234496 - 1235464 | 34882.4 |
| transcriptional regulator, lysr family | SAMN05444679_10414 | Not Available | Positive | 1235511 - 1236476 | 34184.8 |
| regulator of rnase e activity rraa | SAMN05444679_10415 | Not Available | Negative | 1236491 - 1237162 | 23881.8 |
| aspartate aminotransferase | SAMN05444679_10416 | Not Available | Negative | 1237198 - 1238406 | 43217.9 |
| lysr family transcriptional regulator, nitrogen assimilation regulatory protein | SAMN05444679_10417 | Not Available | Positive | 1238725 - 1239663 | 33470.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
