Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein-histidine pros-kinase | SAMN05444679_103299 | Not Available | Negative | 1219588 - 1220460 | 32195.2 |
| fecr family protein | SAMN05444679_103300 | Not Available | Negative | 1220522 - 1221481 | 33925.5 |
| aspartate decarboxylase | SAMN05444679_103301 | Not Available | Positive | 1221838 - 1221954 | 4202.73 |
| hypothetical protein | SAMN05444679_1041 | Not Available | Negative | 1221955 - 1222061 | 3758.58 |
| gluconate 5-dehydrogenase | SAMN05444679_1042 | Not Available | Negative | 1222082 - 1222855 | 27329.8 |
| aspartate aminotransferase | SAMN05444679_1043 | Not Available | Positive | 1223110 - 1224318 | 43644.5 |
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN05444679_1044 | Not Available | Positive | 1224430 - 1225635 | 42868.6 |
| amino acid/amide abc transporter membrane protein 1, haat family | SAMN05444679_1045 | Not Available | Positive | 1225670 - 1226542 | 30864.9 |
| amino acid/amide abc transporter membrane protein 2, haat family | SAMN05444679_1046 | Not Available | Positive | 1226583 - 1227614 | 36376.8 |
| branched-chain amino acid transport system atp-binding protein | SAMN05444679_1047 | Not Available | Positive | 1227604 - 1228377 | 28079.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
