Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444679_103289 | Not Available | Positive | 1207855 - 1208283 | 14612.7 |
| putative auto-transporter adhesin, head gin domain | SAMN05444679_103290 | Not Available | Positive | 1208317 - 1209039 | 25241.7 |
| outer membrane protein ompa | SAMN05444679_103291 | Not Available | Positive | 1209102 - 1209713 | 21452.6 |
| type vi secretion lipoprotein, vc_a0113 family | SAMN05444679_103292 | Not Available | Positive | 1209837 - 1211096 | 46362.7 |
| type vi secretion system protein impk | SAMN05444679_103293 | Not Available | Positive | 1211093 - 1212220 | 38915.0 |
| type vi secretion system protein impl | SAMN05444679_103294 | Not Available | Positive | 1212217 - 1215540 | 120596.0 |
| type vi secretion system protein impm | SAMN05444679_103295 | Not Available | Positive | 1215534 - 1216121 | 21061.3 |
| serine/threonine protein phosphatase prpc | SAMN05444679_103296 | Not Available | Negative | 1216085 - 1216825 | 25756.1 |
| fha domain-containing protein | SAMN05444679_103297 | Not Available | Negative | 1216807 - 1218072 | 44918.7 |
| serine/threonine protein kinase | SAMN05444679_103298 | Not Available | Negative | 1218059 - 1219573 | 54167.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
