Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444679_103279 | Not Available | Negative | 1195909 - 1196112 | 7549.26 |
| acyl carrier protein | SAMN05444679_103280 | Not Available | Positive | 1197070 - 1199799 | 99402.0 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05444679_103281 | Not Available | Positive | 1200961 - 1201557 | 22577.9 |
| hypothetical protein | SAMN05444679_103282 | Not Available | Positive | 1201849 - 1202466 | 22201.7 |
| caspase domain-containing protein | SAMN05444679_103283 | Not Available | Positive | 1202472 - 1203308 | 29304.3 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05444679_103284 | Not Available | Negative | 1203320 - 1204279 | 34693.1 |
| hypothetical protein | SAMN05444679_103285 | Not Available | Positive | 1204456 - 1205028 | 18535.7 |
| hypothetical protein | SAMN05444679_103286 | Not Available | Positive | 1205235 - 1205807 | 18551.7 |
| hypothetical protein | SAMN05444679_103287 | Not Available | Positive | 1205878 - 1206207 | 11198.5 |
| protein of unknown function | SAMN05444679_103288 | Not Available | Positive | 1206237 - 1207871 | 58606.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
