Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_103269 | Not Available | Negative | 1187670 - 1188671 | 35034.5 |
| threonine dehydratase | SAMN05444679_103270 | Not Available | Negative | 1188782 - 1189837 | 36549.1 |
| predicted amidohydrolase | SAMN05444679_103271 | Not Available | Negative | 1189852 - 1190838 | 36990.3 |
| dna-binding transcriptional regulator, lysr family | SAMN05444679_103272 | Not Available | Negative | 1191123 - 1192118 | 36073.2 |
| hypothetical protein | SAMN05444679_103273 | Not Available | Positive | 1192435 - 1193031 | 19681.5 |
| hypothetical protein | SAMN05444679_103274 | Not Available | Negative | 1193108 - 1193251 | 4529.42 |
| haemagluttinin repeat-containing protein | SAMN05444679_103275 | Not Available | Negative | 1193279 - 1193857 | 18776.4 |
| res domain-containing protein | SAMN05444679_103276 | Not Available | Negative | 1193900 - 1194367 | 17281.6 |
| protein of unknown function | SAMN05444679_103277 | Not Available | Negative | 1194364 - 1195014 | 23478.3 |
| dna-damage-inducible protein j | SAMN05444679_103278 | Not Available | Negative | 1195257 - 1195565 | 10940.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
