Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter substrate-binding protein, paat family | SAMN05444679_103259 | Not Available | Negative | 1177496 - 1178353 | 29868.6 |
| predicted amidohydrolase | SAMN05444679_103260 | Not Available | Negative | 1178359 - 1179336 | 36144.1 |
| dihydropyrimidinase | SAMN05444679_103261 | Not Available | Negative | 1179333 - 1180838 | 53976.6 |
| 4-hydroxy-tetrahydrodipicolinate synthase | SAMN05444679_103262 | Not Available | Negative | 1180851 - 1181759 | 31880.8 |
| guanine deaminase | SAMN05444679_103263 | Not Available | Negative | 1181820 - 1183349 | 54704.1 |
| dna-binding transcriptional regulator, lysr family | SAMN05444679_103264 | Not Available | Negative | 1183489 - 1184448 | 34928.4 |
| asp/glu/hydantoin racemase | SAMN05444679_103265 | Not Available | Positive | 1184582 - 1185265 | 24171.8 |
| aminotransferase class i and ii | SAMN05444679_103266 | Not Available | Negative | 1185207 - 1185695 | 17894.3 |
| lysr substrate binding domain-containing protein | SAMN05444679_103267 | Not Available | Positive | 1185699 - 1186172 | 17532.3 |
| n-acyl-d-amino-acid deacylase | SAMN05444679_103268 | Not Available | Negative | 1186189 - 1187658 | 51798.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
