Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444679_103249 | Not Available | Positive | 1161961 - 1162326 | 13500.0 |
| putative baseplate assembly protein | SAMN05444679_103250 | Not Available | Positive | 1162323 - 1164803 | 89601.2 |
| putative baseplate assembly protein | SAMN05444679_103251 | Not Available | Positive | 1164800 - 1167763 | 105296.0 |
| hypothetical protein | SAMN05444679_103252 | Not Available | Positive | 1167760 - 1170066 | 82395.3 |
| uncharacterized protein | SAMN05444679_103253 | Not Available | Positive | 1170077 - 1173508 | 118855.0 |
| transcriptional regulator, abiei antitoxin, type iv ta system | SAMN05444679_103254 | Not Available | Positive | 1173864 - 1174577 | 26251.7 |
| hypothetical protein | SAMN05444679_103255 | Not Available | Positive | 1174574 - 1175488 | 33703.8 |
| amino acid abc transporter membrane protein 2, paat family | SAMN05444679_103256 | Not Available | Negative | 1175380 - 1176054 | 24812.1 |
| amino acid abc transporter membrane protein 1, paat family | SAMN05444679_103257 | Not Available | Negative | 1176067 - 1176747 | 24742.8 |
| amino acid abc transporter atp-binding protein, paat family | SAMN05444679_103258 | Not Available | Negative | 1176753 - 1177499 | 26887.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
