Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444679_103209 | Not Available | Positive | 1118066 - 1118179 | 4026.04 |
| dde superfamily endonuclease | SAMN05444679_103210 | Not Available | Negative | 1118479 - 1118895 | 16193.0 |
| carboxymuconolactone decarboxylase family protein | SAMN05444679_103211 | Not Available | Negative | 1119065 - 1119238 | 6327.77 |
| haemagluttinin repeat-containing protein | SAMN05444679_103212 | Not Available | Negative | 1119583 - 1120005 | 14195.5 |
| protein of unknown function | SAMN05444679_103213 | Not Available | Negative | 1120179 - 1120661 | 17229.1 |
| hypothetical protein | SAMN05444679_103214 | Not Available | Negative | 1120815 - 1121147 | 11634.4 |
| hypothetical protein | SAMN05444679_103215 | Not Available | Negative | 1121144 - 1121827 | 24137.8 |
| hypothetical protein | SAMN05444679_103216 | Not Available | Negative | 1122707 - 1122901 | 6702.17 |
| possible hemagglutinin | SAMN05444679_103217 | Not Available | Negative | 1123435 - 1123977 | 17155.3 |
| hypothetical protein | SAMN05444679_103218 | Not Available | Negative | 1124038 - 1124784 | 25825.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
