Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-oxosteroid 1-dehydrogenase | SAMN05444679_103199 | Not Available | Negative | 1103776 - 1105491 | 61692.5 |
| rieske | SAMN05444679_103200 | Not Available | Negative | 1105499 - 1106854 | 51794.3 |
| acetyl-coa c-acetyltransferase | SAMN05444679_103201 | Not Available | Negative | 1106990 - 1108192 | 42441.1 |
| snoal-like domain-containing protein | SAMN05444679_103202 | Not Available | Negative | 1108218 - 1108796 | 22019.7 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05444679_103203 | Not Available | Negative | 1108793 - 1109605 | 27486.7 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN05444679_103204 | Not Available | Negative | 1109614 - 1110420 | 27433.7 |
| gluconate 5-dehydrogenase/3-oxoacyl-[acyl-carrier protein] reductase | SAMN05444679_103205 | Not Available | Negative | 1110417 - 1111139 | 24428.2 |
| cubico group peptidase, beta-lactamase class c family | SAMN05444679_103206 | Not Available | Positive | 1111345 - 1112499 | 41360.8 |
| transcriptional regulator, iclr family | SAMN05444679_103207 | Not Available | Positive | 1112620 - 1113459 | 29844.4 |
| double zinc ribbon | SAMN05444679_103208 | Not Available | Positive | 1114731 - 1118069 | 121671.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
