Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-fructose 1,6-bisphosphatase | SAMN05444679_10198 | Not Available | Negative | 88130 - 89143 | 37318.9 |
| aminopeptidase n | SAMN05444679_10199 | Not Available | Negative | 89174 - 91888 | 100462.0 |
| haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or ed | SAMN05444679_101100 | Not Available | Negative | 91875 - 92561 | 24529.4 |
| bacterial peptide chain release factor 2 (brf-2) | SAMN05444679_101101 | Not Available | Negative | 92561 - 93463 | 33570.3 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05444679_101102 | Not Available | Negative | 93716 - 94642 | 34696.5 |
| predicted oxidoreductase | SAMN05444679_101103 | Not Available | Positive | 94717 - 95778 | 38949.4 |
| hypothetical protein | SAMN05444679_101104 | Not Available | Positive | 95847 - 96038 | 6627.26 |
| acyl-phosphate glycerol-3-phosphate acyltransferase | SAMN05444679_101105 | Not Available | Positive | 96058 - 96699 | 22343.7 |
| enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 family | SAMN05444679_101106 | Not Available | Positive | 96706 - 97059 | 12603.2 |
| aspartyl protease family protein | SAMN05444679_101107 | Not Available | Negative | 97053 - 97694 | 22140.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
