Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit | SAMN05444679_103189 | Not Available | Negative | 1094452 - 1095714 | 44858.9 |
| crotonobetainyl-coa:carnitine coa-transferase caib | SAMN05444679_103190 | Not Available | Negative | 1095711 - 1096949 | 44372.0 |
| hypothetical protein | SAMN05444679_103191 | Not Available | Negative | 1096966 - 1097193 | 8278.91 |
| hypothetical protein | SAMN05444679_103192 | Not Available | Negative | 1097443 - 1097688 | 8253.87 |
| cytochrome p450 | SAMN05444679_103193 | Not Available | Positive | 1097905 - 1099146 | 46177.2 |
| choline dehydrogenase | SAMN05444679_103194 | Not Available | Positive | 1099155 - 1100756 | 57821.2 |
| pyruvate dehydrogenase e2 component (dihydrolipoamide acetyltransferase) | SAMN05444679_103195 | Not Available | Negative | 1100778 - 1101506 | 25821.3 |
| biotin-requiring enzyme | SAMN05444679_103196 | Not Available | Negative | 1101503 - 1101733 | 7980.6 |
| pyruvate dehydrogenase e1 component beta subunit | SAMN05444679_103197 | Not Available | Negative | 1101766 - 1102776 | 35705.5 |
| pyruvate dehydrogenase e1 component alpha subunit | SAMN05444679_103198 | Not Available | Negative | 1102773 - 1103756 | 35028.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
