Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05444679_103169 | Not Available | Positive | 1070360 - 1071202 | 30013.2 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05444679_103170 | Not Available | Positive | 1071235 - 1072029 | 26573.9 |
| acyl-coa synthetase (amp-forming)/amp-acid ligase ii | SAMN05444679_103171 | Not Available | Positive | 1072029 - 1073615 | 56739.9 |
| major facilitator superfamily protein | SAMN05444679_103172 | Not Available | Negative | 1073635 - 1075104 | 50226.5 |
| hypothetical protein | SAMN05444679_103173 | Not Available | Negative | 1075101 - 1077536 | 88842.3 |
| uncharacterized protein | SAMN05444679_103174 | Not Available | Negative | 1077556 - 1078653 | 38563.4 |
| protein of unknown function | SAMN05444679_103175 | Not Available | Negative | 1078699 - 1080060 | 50006.9 |
| protein of unknown function | SAMN05444679_103176 | Not Available | Negative | 1080081 - 1081787 | 61563.6 |
| major facilitator superfamily protein | SAMN05444679_103177 | Not Available | Negative | 1081927 - 1083396 | 50984.6 |
| dna-binding transcriptional regulator, marr family | SAMN05444679_103178 | Not Available | Negative | 1083477 - 1084226 | 27363.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
