Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase | SAMN05444679_103139 | Not Available | Positive | 1041733 - 1042935 | 45142.1 |
| pimeloyl-coa dehydrogenase, small subunit | SAMN05444679_103140 | Not Available | Positive | 1042942 - 1044084 | 40655.6 |
| transcriptional regulator, iclr family | SAMN05444679_103141 | Not Available | Negative | 1044081 - 1044983 | 32250.8 |
| electron transfer flavoprotein alpha subunit apoprotein | SAMN05444679_103142 | Not Available | Negative | 1044992 - 1045918 | 31067.5 |
| electron transfer flavoprotein beta subunit | SAMN05444679_103143 | Not Available | Negative | 1045920 - 1046669 | 26312.5 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05444679_103144 | Not Available | Negative | 1046683 - 1047585 | 32382.9 |
| enoyl-coa hydratase | SAMN05444679_103145 | Not Available | Negative | 1047610 - 1048404 | 28074.7 |
| acyl-coa dehydrogenase | SAMN05444679_103146 | Not Available | Negative | 1048401 - 1049534 | 40388.2 |
| acyl-coa dehydrogenase | SAMN05444679_103147 | Not Available | Negative | 1049560 - 1050765 | 45427.5 |
| trans-feruloyl-coa synthase | SAMN05444679_103148 | Not Available | Negative | 1050811 - 1052712 | 68363.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
