Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helicase conserved c-terminal domain-containing protein | SAMN05444679_10399 | Not Available | Negative | 985283 - 988129 | 104318.0 |
| eh_signature domain-containing protein | SAMN05444679_103100 | Not Available | Negative | 988119 - 989480 | 51206.5 |
| ompa family protein | SAMN05444679_103101 | Not Available | Negative | 989507 - 990280 | 27651.8 |
| hypothetical protein | SAMN05444679_103102 | Not Available | Negative | 990280 - 991965 | 59779.2 |
| hypothetical protein | SAMN05444679_103103 | Not Available | Negative | 992128 - 992337 | 7415.08 |
| hypothetical protein | SAMN05444679_103104 | Not Available | Negative | 992772 - 993056 | 10656.6 |
| hnh endonuclease | SAMN05444679_103105 | Not Available | Negative | 993149 - 994525 | 50204.5 |
| hypothetical protein | SAMN05444679_103106 | Not Available | Negative | 994558 - 995187 | 23531.0 |
| dna helicase/exodeoxyribonuclease v, alpha subunit | SAMN05444679_103107 | Not Available | Negative | 995263 - 997392 | 74872.8 |
| dna helicase/exodeoxyribonuclease v, beta subunit | SAMN05444679_103108 | Not Available | Negative | 997389 - 1001183 | 138461.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
