Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| stearoyl-coa desaturase (delta-9 desaturase) | SAMN05444679_10188 | Not Available | Positive | 82941 - 84140 | 45418.8 |
| protein of unknown function | SAMN05444679_10189 | Not Available | Positive | 84137 - 84295 | 5375.11 |
| osmotically inducible lipoprotein osmb | SAMN05444679_10190 | Not Available | Negative | 84359 - 84625 | 8704.25 |
| hypothetical protein | SAMN05444679_10191 | Not Available | Negative | 84646 - 84900 | 8834.75 |
| dna-binding transcriptional regulator, lysr family | SAMN05444679_10192 | Not Available | Negative | 84897 - 85835 | 33757.2 |
| hypothetical protein | SAMN05444679_10193 | Not Available | Positive | 85927 - 86346 | 15580.3 |
| hypothetical protein | SAMN05444679_10194 | Not Available | Negative | 86387 - 86698 | 10941.0 |
| ost-hth/lotus domain-containing protein | SAMN05444679_10195 | Not Available | Negative | 86836 - 87660 | 30609.6 |
| hypothetical protein | SAMN05444679_10196 | Not Available | Positive | 87676 - 87930 | 9855.8 |
| Trna-thr | Not Available | Not Available | Positive | 88043 - 88118 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
