Succiniclasticum ruminis strain DSM 11005

Kingdom

Bacillati

Phylum

Bacillota

Class

Negativicutes

Order

Acidaminococcales

Family

Acidaminococcaceae

Genus

Succiniclasticum

Description

Succiniclasticum ruminis strain DSM 11005 is a notable microorganism characterized by having a single replicon, indicating a streamlined genomic structure. This strain is cataloged under the accession number FMYW00000000.1, which serves as a unique identifier for its genomic data. As a member of the microbial community, S. ruminis plays a significant role in the digestive processes of ruminants. Its metabolic capabilities include the fermentation of succinate, a key intermediate in the anaerobic digestion of organic matter. This ability contributes to the overall efficiency of nutrient utilization within the rumen, supporting the health and productivity of host animals. The presence of S. ruminis in the rumen ecosystem highlights the intricate relationships among microbes that facilitate the breakdown of complex carbohydrates. By converting succinate into propionate, this strain aids in the production of short-chain fatty acids, which are essential energy sources for ruminants. This underscores the ecological importance of S. ruminis in maintaining the balance of microbial populations and enhancing the digestive efficiency of herbivorous animals. In summary, Succiniclasticum ruminis strain DSM 11005, with its single replicon and specific metabolic functions, exemplifies the pivotal role of certain microbes in the rumen ecosystem, contributing to the health and productivity of ruminant livestock through its fermentation activities.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassNegativicutes
OrderAcidaminococcales
FamilyAcidaminococcaceae
GenusSucciniclasticum
SpeciesSucciniclasticum ruminis
Strainstrain DSM 11005

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Succiniclasticum ruminis strain DSM 11005 genome assembly, contig:

Gene Summary

Adenine Count

739808 bp

Thymine Count

735583 bp

Guanine Count

730570 bp

Cytosine Count

691528 bp

Genome Length

2900473 bp

Protein-coding Genes

2435 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
3-deoxy-manno-octulosonate cytidylyltransferase (cmp-kdo synthetase)SAMN04487864_101314Not AvailablePositive323335 - 32406327201.9
2-dehydro-3-deoxyphosphooctonate aldolase (kdo 8-p synthase)SAMN04487864_101315Not AvailablePositive324063 - 32488129467.1
arabinose-5-phosphate isomeraseSAMN04487864_101316Not AvailablePositive324905 - 32587934328.1
3-deoxy-d-manno-octulosonate 8-phosphate phosphatase (kdo 8-p phosphatase)SAMN04487864_101317Not AvailablePositive326075 - 32664420508.8
kdo2-lipid iv(a) lauroyltransferaseSAMN04487864_101318Not AvailablePositive326644 - 32754634523.0
lps export abc transporter protein lptcSAMN04487864_101319Not AvailablePositive327536 - 32810221010.6
osta-like proteinSAMN04487864_101320Not AvailablePositive328089 - 32897031328.9
lipopolysaccharide export system atp-binding proteinSAMN04487864_101321Not AvailablePositive328967 - 32968626224.9
lipopolysaccharide export system permease proteinSAMN04487864_101322Not AvailablePositive329697 - 33078840336.0
protein of unknown functionSAMN04487864_101323Not AvailablePositive330914 - 33210143438.9

Displaying genes 321 – 330 of 2496 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.