Pelagirhabdus alkalitolerans strain S5

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Bacillaceae

Genus

Pelagirhabdus

Description

Pelagirhabdus alkalitolerans strain S5 is characterized by its unique genomic structure, possessing a single replicon. This trait may contribute to its adaptability and efficiency in various environments. The strain is cataloged under the accession number FMYI00000000.1, which allows for easy reference in genomic databases. While specific metabolic capabilities and ecological roles of Pelagirhabdus alkalitolerans strain S5 are not detailed, the designation of "alkalitolerans" suggests an ability to thrive in alkaline environments. This adaptability could indicate a niche specialization, potentially allowing the organism to inhabit and contribute to biogeochemical processes in alkaline habitats. The presence of a single replicon may also imply a streamlined genetic organization, which can be advantageous for survival in fluctuating conditions. Understanding the genetic and physiological traits of Pelagirhabdus alkalitolerans strain S5 can enhance knowledge about the diversity of microbial life in alkaline ecosystems and their roles in nutrient cycling.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyBacillaceae
GenusPelagirhabdus
SpeciesPelagirhabdus alkalitolerans
Strainstrain S5

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pelagirhabdus alkalitolerans strain S5
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pelagirhabdus alkalitolerans strain S5 genome assembly, contig:

Gene Summary

Adenine Count

798261 bp

Thymine Count

791853 bp

Guanine Count

467830 bp

Cytosine Count

469338 bp

Genome Length

2527601 bp

Protein-coding Genes

2407 genes

Non-Coding Genes

59 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
capsular exopolysaccharide familySAMN05421734_10156Not AvailableNegative68105 - 6879425339.3
capsular polysaccharide biosynthesis proteinSAMN05421734_10157Not AvailableNegative68769 - 6954227897.5
eal domain, c-di-gmp-specific phosphodiesterase class i (or its enzymatically inactive variant)SAMN05421734_10158Not AvailablePositive69787 - 7048526718.8
uncharacterized membrane protein yvbjSAMN05421734_10159Not AvailablePositive70505 - 7192354177.4
zinc-ribbon domain-containing proteinSAMN05421734_10160Not AvailablePositive71950 - 7279231990.7
ribonucleoside-triphosphate reductase class iii catalytic subunitSAMN05421734_10161Not AvailablePositive72981 - 7485570030.5
ribonucleoside-triphosphate reductase class iii activase subunitSAMN05421734_10162Not AvailablePositive74862 - 7533517508.8
nuclease-related domain-containing proteinSAMN05421734_10163Not AvailableNegative75494 - 7642936210.9
predicted arabinose efflux permease, mfs familySAMN05421734_10164Not AvailablePositive76535 - 7768941342.4
transcriptional attenuator, lytr familySAMN05421734_10165Not AvailablePositive77851 - 7893340791.4

Displaying genes 61 – 70 of 2466 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.