Pelagirhabdus alkalitolerans strain S5

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Bacillaceae

Genus

Pelagirhabdus

Description

Pelagirhabdus alkalitolerans strain S5 is characterized by its unique genomic structure, possessing a single replicon. This trait may contribute to its adaptability and efficiency in various environments. The strain is cataloged under the accession number FMYI00000000.1, which allows for easy reference in genomic databases. While specific metabolic capabilities and ecological roles of Pelagirhabdus alkalitolerans strain S5 are not detailed, the designation of "alkalitolerans" suggests an ability to thrive in alkaline environments. This adaptability could indicate a niche specialization, potentially allowing the organism to inhabit and contribute to biogeochemical processes in alkaline habitats. The presence of a single replicon may also imply a streamlined genetic organization, which can be advantageous for survival in fluctuating conditions. Understanding the genetic and physiological traits of Pelagirhabdus alkalitolerans strain S5 can enhance knowledge about the diversity of microbial life in alkaline ecosystems and their roles in nutrient cycling.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyBacillaceae
GenusPelagirhabdus
SpeciesPelagirhabdus alkalitolerans
Strainstrain S5

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pelagirhabdus alkalitolerans strain S5
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pelagirhabdus alkalitolerans strain S5 genome assembly, contig:

Gene Summary

Adenine Count

798261 bp

Thymine Count

791853 bp

Guanine Count

467830 bp

Cytosine Count

469338 bp

Genome Length

2527601 bp

Protein-coding Genes

2407 genes

Non-Coding Genes

59 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
udp-glucose 4-epimeraseSAMN05421734_10146Not AvailableNegative56216 - 5711534456.0
o-antigen biosynthesis protein wbqpSAMN05421734_10147Not AvailableNegative57112 - 5774424170.6
ndp-sugar epimerase, includes udp-glcnac-inverting 4,6-dehydratase flaa1 and capsular polysaccharide biosynthesis protein epscSAMN05421734_10148Not AvailableNegative57777 - 5960367396.0
utp--glucose-1-phosphate uridylyltransferaseSAMN05421734_10149Not AvailableNegative59676 - 6056033066.7
protein-tyrosine phosphataseSAMN05421734_10150Not AvailableNegative60580 - 6134729222.3
5s ribosomal rna . bacterial tsuNot AvailableNot AvailablePositive63535 - 6362918.01
leucine rich repeat-containing proteinSAMN05421734_10151Not AvailableNegative61812 - 65468140887.0
vtc domain-containing proteinSAMN05421734_10152Not AvailableNegative65472 - 6623330347.5
uncharacterized membrane protein yhid, involved in acid resistanceSAMN05421734_10153Not AvailableNegative66264 - 6694425467.5
thiamine transporterSAMN05421734_10154Not AvailableNegative67249 - 6784221716.2

Displaying genes 51 – 60 of 2466 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.