Bacteroides ovatus strain NLAE-zl-C500

Gram-negativeRodAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides ovatus strain NLAE-zl-C500 is a Gram-negative, anaerobic rod-shaped bacterium primarily found in the gut of Homo sapiens. This strain is characterized by the presence of flagella, contributing to its motility in the anaerobic environment of the human gastrointestinal tract. With a single replicon, Bacteroides ovatus strain NLAE-zl-C500 exhibits a streamlined genetic organization that may facilitate efficient replication and adaptation within its niche. Its habitat in the human gut suggests a role in the complex microbial ecosystem, where it may participate in various metabolic processes essential for digestion and overall gut health. The presence of Bacteroides ovatus in the gut microbiome highlights its potential importance in the breakdown of complex carbohydrates, which can influence nutrient absorption and contribute to the host's metabolic functions. Understanding the specific traits and behaviors of this strain can provide insights into its ecological role, particularly its interactions with other gut microorganisms and its impact on human health. The accession number FMYE00000000.1 provides a reference for genetic and genomic studies that could further elucidate the functional capabilities of this strain within the gut environment.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides ovatus
Strainstrain NLAE-zl-C500

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Bacteroides ovatus strain NLAE-zl-C500
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgut
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacteroides ovatus strain NLAE-zl-C500 genome assembly, contig:

Gene Summary

Adenine Count

1701400 bp

Thymine Count

1710857 bp

Guanine Count

1221853 bp

Cytosine Count

1224735 bp

Genome Length

5862656 bp

Protein-coding Genes

4596 genes

Non-Coding Genes

92 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dinuclear metal center protein, ybgi/sa1388 familySAMN05192581_102514Not AvailableNegative3287838 - 328893240383.6
rna polymerase sigma-70 factor, ecf subfamilySAMN05192581_102515Not AvailablePositive3289211 - 32893846626.75
rna polymerase sigma-70 factor, ecf subfamilySAMN05192581_102516Not AvailablePositive3289385 - 328971413164.9
protein of unknown functionSAMN05192581_102517Not AvailablePositive3289947 - 329036015658.3
hypothetical proteinSAMN05192581_102518Not AvailableNegative3290380 - 329067611503.0
putative abc transport system permease proteinSAMN05192581_102519Not AvailableNegative3290673 - 329146729717.8
putative abc transport system atp-binding proteinSAMN05192581_102520Not AvailableNegative3291515 - 329213522666.6
pd-(d/e)xk nuclease superfamily proteinSAMN05192581_102521Not AvailableNegative3292172 - 329372860739.1
uncharacterized protein, contains ferredoxin domainSAMN05192581_102522Not AvailablePositive3293909 - 329445119551.8
agmatine deiminaseSAMN05192581_102523Not AvailablePositive3294535 - 329565641831.9

Displaying genes 2531 – 2540 of 4688 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.