Bacteroides ovatus strain NLAE-zl-C500

Gram-negativeRodAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides ovatus strain NLAE-zl-C500 is a Gram-negative, anaerobic rod-shaped bacterium primarily found in the gut of Homo sapiens. This strain is characterized by the presence of flagella, contributing to its motility in the anaerobic environment of the human gastrointestinal tract. With a single replicon, Bacteroides ovatus strain NLAE-zl-C500 exhibits a streamlined genetic organization that may facilitate efficient replication and adaptation within its niche. Its habitat in the human gut suggests a role in the complex microbial ecosystem, where it may participate in various metabolic processes essential for digestion and overall gut health. The presence of Bacteroides ovatus in the gut microbiome highlights its potential importance in the breakdown of complex carbohydrates, which can influence nutrient absorption and contribute to the host's metabolic functions. Understanding the specific traits and behaviors of this strain can provide insights into its ecological role, particularly its interactions with other gut microorganisms and its impact on human health. The accession number FMYE00000000.1 provides a reference for genetic and genomic studies that could further elucidate the functional capabilities of this strain within the gut environment.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides ovatus
Strainstrain NLAE-zl-C500

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Bacteroides ovatus strain NLAE-zl-C500
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgut
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacteroides ovatus strain NLAE-zl-C500 genome assembly, contig:

Gene Summary

Adenine Count

1701400 bp

Thymine Count

1710857 bp

Guanine Count

1221853 bp

Cytosine Count

1224735 bp

Genome Length

5862656 bp

Protein-coding Genes

4596 genes

Non-Coding Genes

92 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transcriptional regulator, padr familySAMN05192581_102218Not AvailableNegative3061132 - 306145812615.4
ribosomal protein s18 acetylase rimiSAMN05192581_102219Not AvailablePositive3061623 - 306212019455.6
proton-dependent oligopeptide transporter, pot familySAMN05192581_102220Not AvailableNegative3062193 - 306370755609.8
cys-trna(pro)/cys-trna(cys) deacylaseSAMN05192581_102221Not AvailableNegative3063806 - 306428517715.6
excinuclease abc subunit aSAMN05192581_102222Not AvailableNegative3064390 - 3067215105502.0
lysm domain-containing proteinSAMN05192581_102223Not AvailablePositive3067374 - 306914067287.8
outer membrane protein beta-barrel domain-containing proteinSAMN05192581_102224Not AvailablePositive3069148 - 306988827132.8
protein of unknown functionSAMN05192581_102225Not AvailableNegative3070017 - 307046016552.2
rna polymerase rpb6SAMN05192581_102226Not AvailableNegative3070569 - 307090412919.3
beta-barrel assembly machine subunit bamdSAMN05192581_102227Not AvailableNegative3070919 - 307172231377.2

Displaying genes 2351 – 2360 of 4688 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.