Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus alkaliphilus |
| Strain | strain DSM 22703 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1387136 bp
Thymine Count
1393756 bp
Guanine Count
1030358 bp
Cytosine Count
1036482 bp
Genome Length
4853787 bp
Protein-coding Genes
4334 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN03080617_00039 | Not Available | Negative | 41920 - 44994 | 110166.0 |
| 2'-5' rna ligase | SAMN03080617_00040 | Not Available | Negative | 45488 - 46036 | 21201.3 |
| nucleotide-binding universal stress protein, uspa family | SAMN03080617_00041 | Not Available | Positive | 46357 - 47271 | 34383.9 |
| methyltransferase domain-containing protein | SAMN03080617_00042 | Not Available | Negative | 47261 - 48181 | 35227.2 |
| putative colanic acid biosysnthesis udp-glucose lipid carrier transferase | SAMN03080617_00043 | Not Available | Negative | 48187 - 49557 | 52571.1 |
| methyltransferase domain-containing protein | SAMN03080617_00044 | Not Available | Positive | 49713 - 50384 | 26485.2 |
| abc transporter, permease/atp-binding protein | SAMN03080617_00045 | Not Available | Negative | 50381 - 52168 | 65575.2 |
| 23s ribosomal rna . bacterial lsu | Not Available | Not Available | Positive | 52275 - 52355 | 18.01 |
| sarcosine oxidase | SAMN03080617_00046 | Not Available | Negative | 52237 - 53373 | 41860.0 |
| hypothetical protein | SAMN03080617_00047 | Not Available | Negative | 53423 - 54073 | 24782.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
