Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus alkaliphilus |
| Strain | strain DSM 22703 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1387136 bp
Thymine Count
1393756 bp
Guanine Count
1030358 bp
Cytosine Count
1036482 bp
Genome Length
4853787 bp
Protein-coding Genes
4334 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03080617_04350 | Not Available | Negative | 4805564 - 4805818 | 10084.8 |
| transposase dde domain-containing protein | SAMN03080617_04352 | Not Available | Negative | 4806342 - 4806794 | 17788.2 |
| transposase | SAMN03080617_04353 | Not Available | Negative | 4806795 - 4807069 | 10555.8 |
| hypothetical protein | SAMN03080617_04354 | Not Available | Positive | 4807435 - 4808583 | 44787.7 |
| hypothetical protein | SAMN03080617_04355 | Not Available | Positive | 4808946 - 4809989 | 41109.4 |
| predicted dna-binding transcriptional regulator yafy, contains an hth and wyl domains | SAMN03080617_04356 | Not Available | Negative | 4809980 - 4811005 | 40002.9 |
| zinc-finger of transposase is204/is1001/is1096/is1165 | SAMN03080617_04357 | Not Available | Positive | 4811376 - 4811828 | 17775.3 |
| hypothetical protein | SAMN03080617_04358 | Not Available | Positive | 4812257 - 4812550 | 11085.0 |
| ribosomal protein s18 acetylase rimi | SAMN03080617_04359 | Not Available | Positive | 4812569 - 4813117 | 21836.3 |
| glycosyltransferase wbsx | SAMN03080617_04360 | Not Available | Positive | 4813170 - 4814720 | 59931.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
