Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus alkaliphilus |
| Strain | strain DSM 22703 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1387136 bp
Thymine Count
1393756 bp
Guanine Count
1030358 bp
Cytosine Count
1036482 bp
Genome Length
4853787 bp
Protein-coding Genes
4334 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN03080617_03651 | Not Available | Positive | 4059768 - 4060289 | 19381.4 |
| protein of unknown function | SAMN03080617_03652 | Not Available | Positive | 4060362 - 4061075 | 26931.5 |
| hypothetical protein | SAMN03080617_03653 | Not Available | Negative | 4061114 - 4062328 | 46410.2 |
| protein of unknown function | SAMN03080617_03654 | Not Available | Positive | 4062559 - 4063095 | 20186.8 |
| putative transcriptional regulator | SAMN03080617_03655 | Not Available | Positive | 4063099 - 4063317 | 8009.91 |
| uncharacterized conserved protein ydei, yjbr/cyay-like superfamily, duf1801 family | SAMN03080617_03656 | Not Available | Positive | 4063507 - 4064136 | 23661.1 |
| hopj type iii effector protein | SAMN03080617_03657 | Not Available | Positive | 4064336 - 4064674 | 12443.6 |
| tigr03083 family protein | SAMN03080617_03658 | Not Available | Positive | 4064686 - 4065522 | 31852.5 |
| outer membrane protein assembly factor bama | SAMN03080617_03659 | Not Available | Negative | 4065533 - 4067848 | 87330.6 |
| autotransporter translocation and assembly factor tamb | SAMN03080617_03660 | Not Available | Negative | 4067814 - 4072820 | 184533.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
