Algoriphagus alkaliphilus strain DSM 22703

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Cyclobacteriaceae

Genus

Algoriphagus

Description

Algoriphagus alkaliphilus strain DSM 22703 is a Gram-negative, rod-shaped bacterium. This strain is characterized by having a single replicon, which indicates a streamlined genetic organization. The genomic information for this bacterium can be accessed through the accession number FMXE00000000.1, providing a resource for researchers interested in its genetic makeup and potential applications. As a member of the genus Algoriphagus, A. alkaliphilus is likely to inhabit alkaline environments, which may include soda lakes or other high-pH habitats. The adaptation to such extreme conditions suggests that this bacterium possesses unique metabolic pathways that enable it to thrive where many other organisms cannot. Its physiological traits may contribute to biogeochemical cycles in these specific ecosystems, influencing nutrient availability and microbial community dynamics. Overall, the study of Algoriphagus alkaliphilus DSM 22703 can provide insights into microbial life in alkaline conditions, which is essential for understanding biodiversity and ecological interactions in such environments.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyCyclobacteriaceae
GenusAlgoriphagus
SpeciesAlgoriphagus alkaliphilus
Strainstrain DSM 22703

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Algoriphagus alkaliphilus strain DSM 22703 genome assembly,

Gene Summary

Adenine Count

1387136 bp

Thymine Count

1393756 bp

Guanine Count

1030358 bp

Cytosine Count

1036482 bp

Genome Length

4853787 bp

Protein-coding Genes

4334 genes

Non-Coding Genes

46 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
undecaprenyl-diphosphataseSAMN03080617_03008Not AvailablePositive3312223 - 331301128893.3
integrase core domain-containing proteinSAMN03080617_03009Not AvailableNegative3313182 - 33133968328.99
hypothetical proteinSAMN03080617_03010Not AvailablePositive3313455 - 33136557813.5
cubico group peptidase, beta-lactamase class c familySAMN03080617_03011Not AvailableNegative3313739 - 331495345628.4
protoporphyrinogen oxidaseSAMN03080617_03012Not AvailablePositive3315142 - 331638946527.6
trehalose utilisationSAMN03080617_03013Not AvailableNegative3316610 - 331753334740.4
methane oxygenase pmoaSAMN03080617_03014Not AvailablePositive3317615 - 331858336166.0
tat (twin-arginine translocation) pathway signal sequenceSAMN03080617_03015Not AvailablePositive3318733 - 332010350407.0
oxidoreductase family, nad-binding rossmann foldSAMN03080617_03016Not AvailablePositive3320337 - 332171051825.3
uncharacterized conserved protein ybjt, contains nad(p)-binding and duf2867 domainsSAMN03080617_03017Not AvailablePositive3321772 - 332317853476.0

Displaying genes 3001 – 3010 of 4380 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.