Algoriphagus alkaliphilus strain DSM 22703

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Cyclobacteriaceae

Genus

Algoriphagus

Description

Algoriphagus alkaliphilus strain DSM 22703 is a Gram-negative, rod-shaped bacterium. This strain is characterized by having a single replicon, which indicates a streamlined genetic organization. The genomic information for this bacterium can be accessed through the accession number FMXE00000000.1, providing a resource for researchers interested in its genetic makeup and potential applications. As a member of the genus Algoriphagus, A. alkaliphilus is likely to inhabit alkaline environments, which may include soda lakes or other high-pH habitats. The adaptation to such extreme conditions suggests that this bacterium possesses unique metabolic pathways that enable it to thrive where many other organisms cannot. Its physiological traits may contribute to biogeochemical cycles in these specific ecosystems, influencing nutrient availability and microbial community dynamics. Overall, the study of Algoriphagus alkaliphilus DSM 22703 can provide insights into microbial life in alkaline conditions, which is essential for understanding biodiversity and ecological interactions in such environments.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyCyclobacteriaceae
GenusAlgoriphagus
SpeciesAlgoriphagus alkaliphilus
Strainstrain DSM 22703

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Algoriphagus alkaliphilus strain DSM 22703


Gene Summary

Adenine Count

1387136 bp

Thymine Count

1393756 bp

Guanine Count

1030358 bp

Cytosine Count

1036482 bp

Genome Length

4853787 bp

Protein-coding Genes

4334 genes

Non-Coding Genes

46 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
excinuclease abc subunit aSAMN03080617_00019Not AvailableNegative21394 - 24231105440.0
hypothetical proteinSAMN03080617_00020Not AvailablePositive24808 - 2511611593.3
transglycosylase slt domain-containing proteinSAMN03080617_00021Not AvailableNegative25501 - 2644236679.7
hypothetical proteinSAMN03080617_00022Not AvailablePositive26462 - 265965237.71
hypothetical proteinSAMN03080617_00023Not AvailablePositive26626 - 2781045692.4
hypothetical proteinSAMN03080617_00024Not AvailableNegative27834 - 280407922.57
hypothetical proteinSAMN03080617_00025Not AvailableNegative28095 - 283228536.41
gh3 auxin-responsive promoterSAMN03080617_00026Not AvailableNegative28319 - 2983957904.3
lipopolysaccharide export system atp-binding proteinSAMN03080617_00027Not AvailableNegative29840 - 3057727462.8
single-stranded-dna-specific exonucleaseSAMN03080617_00028Not AvailableNegative30579 - 3230364821.2

Displaying genes 21 – 30 of 4380 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.