Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus alkaliphilus |
| Strain | strain DSM 22703 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1387136 bp
Thymine Count
1393756 bp
Guanine Count
1030358 bp
Cytosine Count
1036482 bp
Genome Length
4853787 bp
Protein-coding Genes
4334 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phytoene/squalene synthetase | SAMN03080617_02968 | Not Available | Negative | 3251267 - 3252109 | 32369.2 |
| phytoene desaturase | SAMN03080617_02969 | Not Available | Negative | 3252131 - 3253615 | 55855.4 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN03080617_02970 | Not Available | Negative | 3253620 - 3254132 | 19878.9 |
| dna-binding transcriptional regulator, merr family | SAMN03080617_02971 | Not Available | Negative | 3254325 - 3255221 | 34361.8 |
| beta-carotene 3-hydroxylase | SAMN03080617_02972 | Not Available | Negative | 3255218 - 3255664 | 17351.3 |
| putative membrane protein | SAMN03080617_02973 | Not Available | Negative | 3255761 - 3256426 | 24778.8 |
| protein of unknown function | SAMN03080617_02974 | Not Available | Positive | 3256523 - 3256825 | 11862.3 |
| tspo and mbr related proteins | SAMN03080617_02975 | Not Available | Positive | 3256828 - 3257292 | 17221.9 |
| imidazolonepropionase | SAMN03080617_02976 | Not Available | Negative | 3257468 - 3261097 | 132806.0 |
| hypothetical protein | SAMN03080617_02977 | Not Available | Negative | 3261248 - 3261991 | 28613.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
