Algoriphagus alkaliphilus strain DSM 22703

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Cyclobacteriaceae

Genus

Algoriphagus

Description

Algoriphagus alkaliphilus strain DSM 22703 is a Gram-negative, rod-shaped bacterium. This strain is characterized by having a single replicon, which indicates a streamlined genetic organization. The genomic information for this bacterium can be accessed through the accession number FMXE00000000.1, providing a resource for researchers interested in its genetic makeup and potential applications. As a member of the genus Algoriphagus, A. alkaliphilus is likely to inhabit alkaline environments, which may include soda lakes or other high-pH habitats. The adaptation to such extreme conditions suggests that this bacterium possesses unique metabolic pathways that enable it to thrive where many other organisms cannot. Its physiological traits may contribute to biogeochemical cycles in these specific ecosystems, influencing nutrient availability and microbial community dynamics. Overall, the study of Algoriphagus alkaliphilus DSM 22703 can provide insights into microbial life in alkaline conditions, which is essential for understanding biodiversity and ecological interactions in such environments.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyCyclobacteriaceae
GenusAlgoriphagus
SpeciesAlgoriphagus alkaliphilus
Strainstrain DSM 22703

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Algoriphagus alkaliphilus strain DSM 22703 genome assembly,

Gene Summary

Adenine Count

1387136 bp

Thymine Count

1393756 bp

Guanine Count

1030358 bp

Cytosine Count

1036482 bp

Genome Length

4853787 bp

Protein-coding Genes

4334 genes

Non-Coding Genes

46 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
serine phosphatase rsbu, regulator of sigma subunitSAMN03080617_02738Not AvailableNegative3016121 - 301819379159.7
protein of unknown functionSAMN03080617_02739Not AvailableNegative3018290 - 301860111813.6
oxygen-independent coproporphyrinogen-3 oxidaseSAMN03080617_02740Not AvailableNegative3018723 - 301976038824.0
hypothetical proteinSAMN03080617_02741Not AvailablePositive3019890 - 302159064700.1
protein of unknown functionSAMN03080617_02742Not AvailablePositive3021605 - 302271442291.6
uroporphyrinogen-iii synthaseSAMN03080617_02743Not AvailablePositive3022749 - 302352229498.9
type ix secretion system membrane protein, porp/sprf familySAMN03080617_02744Not AvailablePositive3023597 - 302457736003.0
gliding motility-associated lipoprotein gldk/gliding motility-associated lipoprotein gldk,tigr03529/gliding motility-associated lipoprotein gldj,tigr03530SAMN03080617_02745Not AvailablePositive3024725 - 302584042213.7
gliding motility-associated protein gldlSAMN03080617_02746Not AvailablePositive3025884 - 302666628088.6
gliding motility-associated protein gldmSAMN03080617_02747Not AvailablePositive3026704 - 302830256955.4

Displaying genes 2731 – 2740 of 4380 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.