Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus alkaliphilus |
| Strain | strain DSM 22703 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1387136 bp
Thymine Count
1393756 bp
Guanine Count
1030358 bp
Cytosine Count
1036482 bp
Genome Length
4853787 bp
Protein-coding Genes
4334 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase | SAMN03080617_02667 | Not Available | Positive | 2942815 - 2944542 | 64651.4 |
| glycosyl hydrolases family 16 | SAMN03080617_02668 | Not Available | Negative | 2944560 - 2945675 | 41184.3 |
| transcriptional regulator, contains xre-family hth domain | SAMN03080617_02669 | Not Available | Negative | 2945944 - 2946747 | 30286.2 |
| dna-binding transcriptional regulator, lysr family | SAMN03080617_02670 | Not Available | Negative | 2946962 - 2947828 | 32796.0 |
| histidine ammonia-lyase | SAMN03080617_02671 | Not Available | Positive | 2948081 - 2949646 | 56604.5 |
| imidazolonepropionase | SAMN03080617_02672 | Not Available | Positive | 2949897 - 2951150 | 45135.3 |
| urocanate hydratase | SAMN03080617_02673 | Not Available | Positive | 2951313 - 2953316 | 74303.4 |
| hypothetical protein | SAMN03080617_02674 | Not Available | Positive | 2953533 - 2953715 | 7063.5 |
| addiction module toxin, rele/stbe family | SAMN03080617_02675 | Not Available | Positive | 2953703 - 2954005 | 11904.5 |
| endonuclease, uma2 family (restriction endonuclease fold) | SAMN03080617_02676 | Not Available | Negative | 2954084 - 2954707 | 23758.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
